SIBO Diet: What to Eat, What to Avoid + How Long to Follow It

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“What should I eat with SIBO?”

It’s the question I get asked more than any other.

I tried them all. Low FODMAP. SCD. GAPS. Elimination diets. Some of them more than once.

And here’s what 5 relapses taught me: more restriction never made me heal faster.

The right SIBO diet calms your symptoms, supports your treatment, and gets you back to eating as many foods as possible.

SIBO Diet: What to Eat, What to Avoid + How Long to Follow It

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SIBO Diet_ What to Eat, What to Avoid + How Long to Follow It agutsygirl.com

Does diet treat SIBO?

On its own, usually no.

Cleveland Clinic calls diet one of many things your provider may suggest, alongside antibiotics or other therapies.1

Food helps with 2 things:

  1. Symptoms. Fewer fermentable carbs means less fuel for the bacteria, and usually less gas and bloating.
  2. Support. The right food choices during and after treatment can make the whole process easier.

The one exception is the elemental diet, which works as a treatment in its own right. More on that below.

Which SIBO diet is best?

There isn’t one perfect SIBO diet. There are 4 you’ll hear about most.

DietWhat it isHow longResearch for SIBO
Low FODMAPCuts fermentable carbs that bacteria feed on3 to 4 weeks, then reintroduceHelps symptoms; not for long term
ElementalLiquid formula with pre-digested nutrients2 to 3 weeks80% normal breath test at 14 days in one study
SCDRemoves grains, most sugars, and starchesVaries by practitionerNo controlled SIBO trials
Bi-phasicLow FODMAP + SCD in 2 phases alongside treatmentMatches treatment lengthNo controlled SIBO trials

1. Low FODMAP diet

FODMAPs are fermentable carbohydrates: Fermentable Oligosaccharides, Disaccharides, Monosaccharides, And Polyols.

They’re food classifications, not food groups. Lactose in milk is a FODMAP, for example, which is why lactose-free milk is usually fine.

Bacteria feed on FODMAPs. Cut them back, and there’s less to ferment.

Cleveland Clinic describes an elimination phase of about 3 to 4 weeks during treatment, then bringing high-FODMAP foods back one group at a time.2

Make note: Cleveland Clinic says plainly that staying low FODMAP long term isn’t recommended, because these foods feed your healthy gut bacteria too.

In one trial in people with IBS, 4 weeks of low FODMAP eating lowered levels of Bifidobacterium, one of the good guys.2

Low FODMAP is a short-term tool.

Grab my Printable FODMAP Food List to make it easier.

What are FODMAPs agutsygirl.com #fodmap #fodmaps #SIBO

2. Elemental diet

An elemental diet is a liquid formula where the nutrients are already broken down, so they absorb high up in the small intestine. That leaves very little for bacteria to eat.

In one study, 80% of people with an abnormal breath test had a normal test after 14 days on an elemental diet.3

Cleveland Clinic notes it typically lasts 2 to 3 weeks and “only works if you stay with it.”

It’s hard. Liquid only, for weeks. But for some people, especially those who can’t or won’t take antibiotics, it’s a real option.

Here’s how to do a DIY Elemental Diet for SIBO.

3. Specific Carbohydrate Diet (SCD)

SCD removes grains, most sugars, and starchy foods, and keeps meat, fish, eggs, most vegetables, some fruits, and some aged cheeses.

Some practitioners combine it with low FODMAP for SIBO.

Make note: I couldn’t find controlled trials testing SCD for SIBO specifically. It’s a clinical approach, so try it with a practitioner if you go this route.

4. Bi-phasic diet

The bi-phasic diet was created by Dr. Nirala Jacobi, a SIBO-focused naturopathic doctor. It combines low FODMAP and SCD in 2 phases that line up with treatment.

I talked with Dr. Jacobi about SIBO on the podcast. Listen to SIBO vs IBS with Dr. Nirala Jacobi.

Like SCD, it’s practitioner-built and hasn’t been tested in large trials.

What to eat with SIBO (and what to avoid)

This list follows a low FODMAP approach, the one with the most practical support for SIBO symptoms. These examples come from Cleveland Clinic.1

Food typeUsually better toleratedLimit or avoid at first
FruitGrapes, oranges, strawberriesApples, pears, cherries
VegetablesCarrots, cucumbers, tomatoesOnions, cauliflower, mushrooms
ProteinEggs, plain cooked meat, poultry, seafoodBeans and lentils
DairyAlmond milk, soy milkMilk, ice cream, soft cheeses
GrainsQuinoa, oatsWheat, rye
Nuts + seedsWalnuts, pumpkin seedsPistachios, cashews
SweetenersSmall amounts onlyHoney, sugar, xylitol, sorbitol
Examples from Cleveland Clinic. Your own tolerance may differ.

Your list will look a little different. Some “safe” foods will bother you, and some “avoid” foods won’t.

And watch the dose. Many foods are fine in small amounts and a problem in big ones.

Hungry for ideas? My SIBO Diet Recipes are all built around these foods.

Need meal ideas that fit?
See My SIBO Diet Recipes

What to eat during SIBO treatment

This surprised me.

During antibiotics or herbals, don’t go more restrictive than you need to.

In one trial, people who took rifaximin with a fiber called partially hydrolyzed guar gum cleared SIBO 85% of the time. Rifaximin alone cleared it 62% of the time.4

That’s one study. Still, it’s a good reason not to over-restrict during treatment.

Ask your doctor what they want you eating during your specific protocol.

You can see what I ate during my final 28-day rifaximin + neomycin round.

How long should you follow a SIBO diet?

Shorter than you think.

  • Low FODMAP: about 3 to 4 weeks of elimination, then reintroduce1
  • Elemental: about 2 to 3 weeks1
  • After treatment: start bringing foods back as soon as your symptoms settle

The goal is the widest diet your gut can handle.

How to reintroduce foods after SIBO

  1. Go one food group at a time. Cleveland Clinic recommends bringing high-FODMAP groups back one by one.
  2. Start small. A few bites, not a full serving.
  3. Give it 2 to 3 days before adding the next one.
  4. Track everything. Food, symptoms, sleep, stress. Patterns show up fast on paper.
  5. Retry later. A food that bothers you in week 1 may be fine in month 3.

Track with an app and/or physical journal.

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Don’t forget meal spacing

What you eat matters. When you eat matters too.

Your small intestine runs a cleanup wave between meals called the migrating motor complex. It only runs while you’re fasting, and eating stops it. Research links a missing cleanup wave to SIBO.5

Constant grazing means that wave rarely gets a chance to run.

For me personally, spacing my meals was one of the biggest changes I made. Read more in Fasting to Cure SIBO.

What I learned beyond the diet

In July 2018, right after my final round of antibiotics, I wrote the first version of this post.

Most of it was about movement. My symptom journal showed that running and intense workouts lined up with my bloating.

So I changed more than my plate:

  • I stopped running and high-intensity workouts and switched to lighter strength training with a focus on my core.
  • I walked, 20 to 60 minutes most days, no intensity.
  • I ate lower carb and lower FODMAP, in small amounts, and planned to bring foods back over time.
  • I got regular massages for the tension I carried in my core.
  • I worked on stress, with breathing and calming techniques.

I haven’t relapsed since July 2018.

Diet was one piece. Movement, stress, and meal spacing were the rest.

Read the full story in How I Healed SIBO Long Term, and if SIBO keeps coming back for you, read When SIBO Keeps Relapsing.

The printable SIBO diet
Every food list in one place
Reasonable SIBO has the FODMAP food lists, about 200 food graphics, and covers hydrogen, methane, and hydrogen sulfide SIBO.
Get the Printable SIBO Diet

SIBO diet FAQ

What is the best diet for SIBO?

There’s no single best SIBO diet. Low FODMAP is the most common choice for symptoms, and the elemental diet is the only one with research showing it can normalize a breath test on its own. The best one is the least restrictive diet that controls your symptoms.

Can you cure SIBO with diet alone?

Usually not. Diet helps manage symptoms and supports treatment. The exception is the elemental diet, which normalized breath tests in 80% of people in one study.

How long should I stay on a low FODMAP diet for SIBO?

About 3 to 4 weeks of elimination, then reintroduce foods one group at a time. Long-term low FODMAP eating isn’t recommended.

What should I eat during SIBO antibiotics?

Ask your doctor about your specific protocol. In one study, adding a fiber to rifaximin raised the clearance rate from 62% to 85%, so very strict restriction during treatment may not help.

You might also enjoy:

  1. The 3 Types of SIBO: Hydrogen, Methane (IMO), and Hydrogen Sulfide Explained
  2. How to Heal SIBO: 5 Steps to Start (From Someone Who Did)
  3. GLP-1 Medications and SIBO: Can Ozempic, Wegovy, Mounjaro, or Zepbound Trigger Bacterial Overgrowth?

This post may contain affiliate links. I only share products I use and trust.

This content is for education only and isn’t medical advice. Please work with your doctor before starting or changing any treatment.

Xox,

SKH

  1. https://health.clevelandclinic.org/sibo-diet ↩︎
  2. https://pubmed.ncbi.nlm.nih.gov/28625832/ ↩︎
  3. https://pubmed.ncbi.nlm.nih.gov/14992438/ ↩︎
  4. https://pubmed.ncbi.nlm.nih.gov/20937045/ ↩︎
  5. https://pubmed.ncbi.nlm.nih.gov/22450306/ ↩︎
A Gutsy Girl

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13 Comments

  1. Finding your blog came just at the right time. I was diagnosed with methane and hydrogen sibo and after the first round the methane went down but the hydrogen went up. My dr said she has seen that before. Have you heard of that happening? Anyway, I did another round of the antibiotics, and retested yesterday. I related to how miserable the lactulose made you feel, as I was bloated and in so much pain for the rest of the day. I am hoping that my hydrogen levels went down , but because of my test symptoms, I’m feeling discouraged. Can you give me some words of encouragement that there is still hope for me? I’m feeling anxious and depressed…. thank you so much!

  2. Love following along with your journey! I am interested in taking another round of Rifaximin (I tried it years ago and it seemed to help). Do you think it will help with IBS-C? My bloating has been so awful lately- it looks like I am pregnant. It’s impacting my mood and causing me great anxiety.

    I know you mentioned you buy your Rifaximin in Australia- do you know if it is covered at all by insurance in the U.S.? I hope to get it at a reasonable price (but that seems like it is going to be a challenge)!

    Thanks for sharing your story and for giving people like me, hope.

  3. So conforting to know that the numbers could go down even after the test made me so sick.
    Have you or your readers ever heard of hydrogen numbers going up after methane goes down?
    Thanks so much for your time with these questions.

  4. I was diagnosed with SIBO (and later Hashimoto’s and adrenal fatigue) in 2016 during a time when I’d been running a lot, and I had a sense that running was somehow causing some of my problems. I had been training for a spring half marathon, and unlike previous years, I had been building up mileage through the winter instead of taking it easy during the winter. I’m sure there were other things too that all came together to create a perfect storm, so to speak. I loved running. A lot of my friends were through my weekly running group. But running made me feel horrible. The run itself would be fine, but then hours after a run I would sometimes have heart palpitations, feel nauseous and get hot — almost like I was having a panic attack. I knew I had eaten plenty and I was hydrated. I would ask fellow runners, doctors, and staff at the running store about this but nobody had heard of such a thing. It has been a year and a half now since I even tried running. I feel 90% better than I did when I had SIBO, but there’s still a piece of me that isn’t ready to try running again. So now I walk and do yoga. I still meet my weekly running group friends, but now I walk. Usually someone is nursing an injury or recovering from a long race, so someone walks with me. I haven’t even missed running, actually. I did in the beginning but I’ve gotten over it. You might run again, but your health is more important. My functional medicine doctor is not a fan of long distance running and says that anything over about 40 minutes isn’t beneficial, anyway.

  5. Oh Traci – I NEEDED to hear this this morning. THANK YOU, THANK YOU. Your comment and thoughts are so inspiring. So glad to hear how well you have healed. Keep in touch, okay?!

  6. Hi Jess – Thank you so kindly for stopping by. If you have SIBO and it’s methane dominant, which I am assuming with the IBS-C, you likely need Rifaximin + Neomycin. Has your doctor mentioned that? In any case, the Rifaximin is NOT covered in Australia, but I got an entire 28-day supply for less than $300. You would need a doctor’s prescription to get it, though. Good luck!

  7. Bernadette, this happened to me. At my retest after my first round of treatment, my hydrogen went up and methane went down. My doctor explained it like this: in a nutshell, the organisms called arachea that produce methane feed off of hydrogen, and when you kill off those arachea, there are fewer of them around to snack on the hydrogen, so hydrogen goes up. Hope that helps!

  8. Massages are great because they help your body get into more of a parasympathetic state, so your gut will move. If your body is stuck in a sympathetic mode (all wired as many people tend to be), your gut will tend to run slowly or stop. With SIBO, your motility will be disrupted (either too slow or too fast), so anything you can do to keep the stress down and allow the body to just do its thing is good.

  9. When you were taking your antibiotics, you had mentioned in a previous post about going low FODMAP then trying to incorporate FODMAPS while on your antibiotics. Which do you think helped more???? I’m currently taking CANDIDA SAP (herbal antibiotic) through the advice of my natural path. I take them on and off every two weeks. I notice I don’t have the bloating issues from FODMAPS while taking them, it’s when I stop taking them when FODMAPS cause issues again. I was just diagnosed in November 2018.

  10. Hey! I was just diagnosed with hydrogen and methane dominant SIBO. It was nice to finally get some answers after years of feeling bloated (so much so that I just thought this was supposed to be a normal part of life). I feel like I have a long road ahead and feel as though the damage is going to take a long time to heal. I am an avid runner, but cut down in the past year because my knees started to hurt. I have always had stomach issues after running and this makes sense to me now. I have been on the biphasic diet for two weeks and also had bloodwork done that showed I was allergic to many other things (things my doctor said I was probably not allergic to but was triggering my SIBO because things are way out of whack down there). Bloating has gone away except for the past few days, so I think I am going to start journaling. Have you had any issues with constipation going on the restricted diet? Anyways, I ramble. I just wanted to say that I found this blog and it has been a GODSEND. To find a community and something so relatable is helping me not feel so alone as my friends and family continue eating whatever they want. I want healing so bad and I am determined to do whatever it takes, but whew! It is a mind game. Thank you for all of your insight and advice! <3 You've been a blessing!

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